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Forum: Literature Watch 04-11-2012, 01:18 PM
Replies: 1
Views: 1,836
Posted By tusharbiot
That's a cool pub. How did I missed it in first...

That's a cool pub. How did I missed it in first place!?. Thanks for putting it up here.
Forum: Bioinformatics 04-08-2012, 08:07 AM
Replies: 5
Views: 1,768
Posted By tusharbiot
Thanks all! The script worked.

Thanks all! The script worked.
Forum: Bioinformatics 04-06-2012, 11:51 AM
Replies: 5
Views: 1,768
Posted By tusharbiot
perl script for removing sequences with "X" in them

Hi all!

I have a multi-fasta file which was masked to remove vector contamination. This has yielded some sequences to have "X" in them (probably the one which were partially masked). I wish to...
Forum: Bioinformatics 04-05-2012, 05:37 AM
Replies: 5
Views: 1,912
Posted By tusharbiot
faozhi, so that would mean you combined them...

faozhi, so that would mean you combined them after the quality screening.
Forum: Bioinformatics 04-04-2012, 01:10 PM
Replies: 5
Views: 1,912
Posted By tusharbiot
With join I meant should I combine the two files...

With join I meant should I combine the two files into one (basically the tool I am using just concatenates the two sequences from a single locus/index).
Forum: Bioinformatics 04-04-2012, 10:42 AM
Replies: 5
Views: 1,912
Posted By tusharbiot
Pre processing of Illumina data

Hi all!

Though there have been many similar posts, but to have an updated (and more recent) thought, hence I am posting it again.

I have some Illumina GAIIX paired end data in two separate...
Forum: Introductions 04-03-2012, 01:13 PM
Replies: 373
Views: 109,821
Posted By tusharbiot
Hi to all I am a doctoral student,...

Hi to all

I am a doctoral student, assembling partial fosmid libraries and organellar genome from the plant family Zingiberaceae.
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