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Search: Posts Made By: Vincenzo
Forum: Bioinformatics 03-18-2011, 07:51 AM
Replies: 1
Views: 3,529
Posted By Vincenzo
Dears, this is my config file. I have not a...

Dears,
this is my config file.
I have not a sam file in the output, but only some sh script: match.sh, localign.sh, postprocess.sh, sam.sh.
I don't know what is the next step because, as i write...
Forum: General 02-22-2011, 02:51 AM
Replies: 3
Views: 2,700
Posted By Vincenzo
Can you share a complete file.xml to inspire and...

Can you share a complete file.xml to inspire and help me in the develop of this config file?
For example a file.xml that you used to run your jobs.
Thanks a lot:D
Forum: Bioinformatics 02-22-2011, 12:03 AM
Replies: 6
Views: 2,808
Posted By Vincenzo
Dear, i have the same problem. Did you solve...

Dear,
i have the same problem.
Did you solve it?
If yes, please can you shared your script?
I sent an e-mail to the group with object "Bfast parallel running".
Thanks a lot
Forum: General 02-21-2011, 11:39 AM
Replies: 3
Views: 2,700
Posted By Vincenzo
Bfast parallel running

Dear,
i am a beginner:confused:.
I have a question about the running of bfast in parallel way.
_i downloaded the XML schema.
_ i have all files for the running: .brg, .bif, .fai.,reads.fastq
My...
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