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Forum: Bioinformatics 01-03-2020, 08:26 PM
Replies: 0
Views: 782
Posted By adamrork
Scaffolding with reads from other individuals

I'm currently woking on the assembly of a diploid eukaryotic genome using a combination of PacBio Sequel subreads and Illumina NextSeq paired-end reads from a single individual. Prior to this, we had...
Forum: Bioinformatics 12-13-2019, 09:46 AM
Replies: 2
Views: 931
Posted By adamrork
Ah, great point! I'll do that. Thank you!

Ah, great point! I'll do that. Thank you!
Forum: Bioinformatics 12-12-2019, 07:46 PM
Replies: 2
Views: 931
Posted By adamrork
Trimming stringency w/ excessive data

I'm in the process of assembling a 500Mb animal genome and have both Illumina and PacBio data to work with using a hybrid assembly approach. Generally when I assemble de novo transcriptomes or...
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