SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 2 of 2
Search took 0.00 seconds.
Search: Posts Made By: rodf
Forum: Bioinformatics 03-17-2015, 04:59 PM
Replies: 39
Views: 33,238
Posted By rodf
Hi Brian, I'm using the Mira assembler to...

Hi Brian,

I'm using the Mira assembler to assemble Illumina MiSeq reads I got from NCBI/SRA. I use "fastq-dump --split-files -F xxxx.sra" to extract the reads and get two files. Each set of...
Forum: Bioinformatics 03-17-2015, 04:24 PM
Replies: 39
Views: 33,238
Posted By rodf
addslash=t problem

Hi Brian,

I tried to use reformat to add /1 and /2 to paired read names and a space was added between the name and the slash and this does not work for the assembler.

i.e.
want name/1 but...
Showing results 1 to 2 of 2

 


All times are GMT -8. The time now is 06:32 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO