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Search: Posts Made By: vijesh
Forum: Bioinformatics 06-27-2013, 09:47 PM
Replies: 0
Views: 876
Posted By vijesh
mi RNA finding from RNASEQ data

i have RNASEQ data.. How can identify miRna from this,? :confused:
Forum: Bioinformatics 06-17-2013, 11:09 PM
Replies: 0
Views: 787
Posted By vijesh
Red face RMTGeneNET, c program is not running

/* v2: Replaces the GSL eigenvalue solver with the MAGMA solver */
/* v2-1: Branching from v2, attempting to use the ACML lapack
* eigenvector solver instead of MAGMA (or perhaps as an
*...
Forum: Bioinformatics 06-14-2013, 01:11 AM
Replies: 5
Views: 2,202
Posted By vijesh
Red face viral genom vs transcript

i dont have the annotation file(gtf) .i have only the virus genome file (fasta) and transcript file(fasta).....
Forum: Bioinformatics 06-11-2013, 10:17 PM
Replies: 0
Views: 729
Posted By vijesh
Question banjo gene network software

how can i create input files for banjo gene network software. I gave gene expression profiles downloaded from array express. but i am not getting the output graph.
any idea ?
Forum: Bioinformatics 06-11-2013, 09:51 PM
Replies: 5
Views: 2,202
Posted By vijesh
doubt regarding tophat

can we put the two files as input in tophat.means that genome file in fasta and also the transcript file?
Forum: Bioinformatics 06-11-2013, 02:17 AM
Replies: 5
Views: 2,202
Posted By vijesh
Question Viral genome vs transcripts

i have a fasta file containing all the virus genome which will affect cassava. i have transcript file also in fasta. in transcript file each transcript have 100 nucleotide length. I want to know...
Forum: Introductions 06-11-2013, 02:02 AM
Replies: 0
Views: 799
Posted By vijesh
Red face banjo gene network software

i have downloaded banjo. also the gene expression profiles from array express.how can i make the input file for banjo.actually it is not working with the downloaded gene expression profiles.
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