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Forum: RNA Sequencing 04-11-2019, 08:08 AM
Replies: 3
Views: 789
Posted By NDUFB11
ok maybe I got it, if someone wants to choose...

ok maybe I got it,
if someone wants to choose featureCounts does it otherwise can use the output file.tab of STAR :)
Forum: RNA Sequencing 04-11-2019, 08:03 AM
Replies: 3
Views: 789
Posted By NDUFB11
Hi GenoMax, I performed an alignment with...

Hi GenoMax,

I performed an alignment with STAR and I have serveal output files.

One output is this:

Sample1ReadsPerGene.out

The counting of the reads is already done by STAR, so why I...
Forum: RNA Sequencing 04-11-2019, 07:18 AM
Replies: 3
Views: 789
Posted By NDUFB11
Counting and Recount reads with featureCotuns

Hello everyone,

I am using different tools for getting alignments and read count such as,
salmon and STAR.
Both of this tools have reads counted output that I could use directly into DESeq2...
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