Forum: Bioinformatics
01-23-2012, 12:52 AM
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Replies: 4
Views: 524
Most assemblers have a function to obtain the...
Most assemblers have a function to obtain the average coverage for each contig - it's a long time since I've used ABySS so I can't remember if it has an output contig coverage option.
Otherwise...
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Forum: Bioinformatics
01-22-2012, 05:21 PM
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Replies: 4
Views: 524
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Forum: Bioinformatics
12-22-2011, 11:32 PM
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Replies: 5
Views: 1,461
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Forum: Bioinformatics
12-22-2011, 01:43 AM
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Replies: 5
Views: 1,461
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Forum: Bioinformatics
06-03-2011, 11:38 AM
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Replies: 7
Views: 1,220
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Forum: Bioinformatics
05-26-2011, 11:01 AM
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Replies: 9
Views: 1,648
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Forum: De novo discovery
05-02-2011, 08:10 AM
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Replies: 8
Views: 2,123
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Forum: RNA Sequencing
04-15-2011, 05:32 AM
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Replies: 3
Views: 979
There are basically two possible problems:
...
There are basically two possible problems:
1) The removal efficiency is highly dependant on intact rRNA. Make sure that rRNA is not degraded before applying MICROBExpress.
Working faster and...
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Forum: Bioinformatics
10-23-2010, 01:38 AM
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Replies: 7
Views: 1,929
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Forum: Bioinformatics
10-20-2010, 10:13 PM
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Replies: 7
Views: 1,929
You should check: A human gut microbial gene...
You should check: A human gut microbial gene catalogue established by metagenomic sequencing. (doi:10.1038/nature08821)
To my knowledge this is the only study who have published large scale...
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