Forum: Bioinformatics
08-10-2020, 12:41 AM
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Replies: 2
Views: 1,389
Yes, see here:...
Yes, see here: https://benjjneb.github.io/dada2/bigdata_paired.html
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Forum: Bioinformatics
10-28-2019, 03:45 AM
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Replies: 1
Views: 1,110
you can use the tximport package to import...
you can use the tximport package to import kallisto output into R and then just use DEseq2. See here:https://bioconductor.org/packages/release/bioc/vignettes/tximport/inst/doc/tximport.html
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Forum: Metagenomics
09-09-2019, 04:53 AM
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Replies: 4
Views: 6,124
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Forum: Metagenomics
09-09-2019, 01:31 AM
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Replies: 4
Views: 6,124
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Forum: Metagenomics
04-04-2018, 02:48 AM
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Replies: 2
Views: 5,338
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Forum: General
12-04-2017, 07:31 AM
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Replies: 4
Views: 1,815
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Forum: General
10-16-2017, 04:24 AM
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Replies: 4
Views: 1,815
Was this just from one mouse? Have you looked...
Was this just from one mouse? Have you looked into the possibility of other intestinal enterobacteriaceae? I work with mice/16s sequencing too and although we often find E.coli it's definitely not a...
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Forum: General
08-21-2017, 05:25 AM
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Replies: 2
Views: 1,576
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