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Forum: Bioinformatics 01-27-2010, 12:38 PM
Replies: 0
Views: 1,386
Posted By mlee
Question convert Maq to SAM


I am still a beginner to Linux and I have been trying to convert my Maq output to SAM using SAMtools but I keep getting "Bus error" on my terminal. Am I typing in the command wrong?
Forum: Bioinformatics 01-15-2010, 11:25 AM
Replies: 3
Views: 1,748
Posted By mlee
Question alignment software and ref sequence

We are currently using MAQ to align our Solexa reads to our reference sequence. Does anyone know if MAQ can also tell me which parts of my reference sequence have no reads aligned to them? If not,...
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