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Forum: Bioinformatics 01-17-2012, 06:16 AM
Replies: 3
Views: 4,095
Posted By rand
Thanks, it helped me.

Thanks, it helped me.
Forum: Bioinformatics 11-09-2009, 06:02 AM
Replies: 2
Views: 2,324
Posted By rand
thanks

Thanks!

I just want to add that the N's in my sequence are not for ambigious bases, they represent a sequence gap of unknown size.. So basically its a long stretch...
Forum: Bioinformatics 11-08-2009, 11:45 PM
Replies: 2
Views: 2,324
Posted By rand
bwa masked sequence?

Does anyone know if BWA is handling masked sequences properly? I'm having a problem where I find some reads aligned to genome gaps. I have tried converting the N's to X's, but still encountering the...
Forum: 454 Pyrosequencing 07-23-2009, 11:59 PM
Replies: 4
Views: 3,068
Posted By rand
It will most likely be possible to sequence the...

It will most likely be possible to sequence the genome, but the assembly process will be tricky since most plant genomes are extremely repetitive, so in the end you might end up with a very...
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