SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 17 of 17
Search took 0.18 seconds.
Search: Posts Made By: Gig77
Forum: Academic/Non-Profit Jobs 07-26-2016, 11:28 PM
Replies: 2
Views: 1,067
Posted By Gig77
Depends on qualification and is negotiable.

Depends on qualification and is negotiable.
Forum: Academic/Non-Profit Jobs 07-26-2016, 01:23 AM
Replies: 2
Views: 1,067
Posted By Gig77
Bioinformatician/Bioinformatics Data Analyst, Vienna, Austria

The St. Anna Kinderspital and the Childrenīs Cancer Research Institute (CCRI) located in Vienna, Austria, are known for providing the highest quality of childhood cancer patient care and development...
Forum: Academic/Non-Profit Jobs 07-20-2015, 09:36 PM
Replies: 0
Views: 509
Posted By Gig77
Bioinformatician/systems biologist at Children's Cancer Research Institute, Vienna

Postdoctoral Research Fellow in Bioinformatics at CCRI, Vienna – Systems Biology of Childhood Cancer

We are looking for an enthusiastic bioinformatician who would like to pursue her/his...
Forum: Bioinformatics 03-31-2013, 07:31 AM
Replies: 2
Views: 1,739
Posted By Gig77
If you only have cDNA and genomic sequences...

If you only have cDNA and genomic sequences (without gene models), you will have to align your cDNA sequences first against the genomic sequences to get exon coordinates (using e.g. BLAT). From these...
Forum: General 03-31-2013, 07:19 AM
Replies: 2
Views: 2,201
Posted By Gig77
Look for CpG islands and methylation. My...

Look for CpG islands and methylation. My understanding is that CG dinucleotides are selected against because they are prone to methylation with subsequent deamination.
Forum: Bioinformatics 01-30-2013, 05:31 AM
Replies: 4
Views: 1,394
Posted By Gig77
Yes, that is correct. You need to have gene...

Yes, that is correct. You need to have gene models first.
Forum: Bioinformatics 01-29-2013, 04:32 PM
Replies: 4
Views: 1,394
Posted By Gig77
Have a look at FeatureStack. Disclaimer: I am...

Have a look at FeatureStack. Disclaimer: I am author of this program.
Forum: Bioinformatics 12-29-2012, 05:59 AM
Replies: 10
Views: 3,969
Posted By Gig77
BMC Research Notes

BMC Research Notes
Forum: Bioinformatics 11-28-2012, 07:35 AM
Replies: 6
Views: 2,616
Posted By Gig77
Yes it can.

Yes it can.
Forum: Bioinformatics 11-21-2012, 04:33 PM
Replies: 6
Views: 2,616
Posted By Gig77
genBlastG should work fine in such a setting.

genBlastG should work fine in such a setting.
Forum: Bioinformatics 11-09-2012, 02:12 PM
Replies: 8
Views: 10,962
Posted By Gig77
Try to increase the height of your jpeg and see...

Try to increase the height of your jpeg and see what you get.
Forum: Bioinformatics 11-08-2012, 07:51 PM
Replies: 1
Views: 1,845
Posted By Gig77
CooVar does not depend on external databases and...

CooVar does not depend on external databases and works directly from GFF files.

http://www.biomedcentral.com/1756-0500/5/615/abstract
Forum: Bioinformatics 11-04-2012, 06:58 AM
Replies: 2
Views: 7,457
Posted By Gig77
Have you tried the -e parameter? I suppose -a...

Have you tried the -e parameter? I suppose -a should also be used to get rid of alternate alleles not found in the subset.

Here is the usage of vcf-subset:

Usage: vcf-subset [OPTIONS] in.vcf.gz...
Forum: Literature Watch 11-02-2012, 03:58 PM
Replies: 0
Views: 948
Posted By Gig77
CooVar: Co-occurring variant analyzer

http://www.biomedcentral.com/1756-0500/5/615/abstract

Background

Evaluating the impact of genomic variations (GV) on protein-coding transcripts is an important step in identifying variants of...
Forum: Introductions 10-27-2012, 06:40 AM
Replies: 2
Views: 848
Posted By Gig77
Have you tried conditional formatting in MS Excel...

Have you tried conditional formatting in MS Excel 2010 or higher?
Forum: Illumina/Solexa 09-24-2012, 08:40 PM
Replies: 2
Views: 1,188
Posted By Gig77
Give genBlastG a try

Give genBlastG a try
Forum: Service Providers 06-07-2012, 07:54 PM
Replies: 1
Views: 2,497
Posted By Gig77
You could start here: ...

You could start here:
http://grouthbio.com/Genome_Software_Service.php
Showing results 1 to 17 of 17

 


All times are GMT -8. The time now is 06:18 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2019, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO