SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 5 of 5
Search took 0.00 seconds.
Search: Posts Made By: darshan
Forum: Illumina/Solexa 02-17-2010, 09:27 AM
Replies: 3
Views: 3,728
Posted By darshan
RNA-seq data from Illumina/Solexa

I cannot find exact answers to these questions. Please help.

1. If gene A is in +ve strand, will the RNA-seq reads also match the exons from +ve strand of the genome. Will there also be reads...
Forum: Bioinformatics 11-25-2009, 09:20 AM
Replies: 12
Views: 6,793
Posted By darshan
Its now resolved. I was getting a file with a...

Its now resolved.
I was getting a file with a funny name as output and bwa executable was of 0 bytes

Now I did:
cd bwt_gen
make
cd ..
make

I suggest a section "how to install bwa" in the...
Forum: Bioinformatics 11-25-2009, 08:28 AM
Replies: 12
Views: 6,793
Posted By darshan
BWA: Can't get it to compile

I am not an advanced C user. Can't get BWA to compile on Ubuntu 9.04

:~/nextgen/tools/bwa-0.5.5$ make
make[1]: Entering directory `/csbiohome/darshan/nextgen/tools/bwa-0.5.5'
make[1]: Nothing to...
Forum: Bioinformatics 09-30-2009, 09:14 AM
Replies: 1
Views: 8,989
Posted By darshan
Difference in paired-end and single-end read ?

What is the difference and how does it work for illumina-solexa?

Thanks
Darshan
Forum: Illumina/Solexa 09-29-2009, 05:30 PM
Replies: 74
Views: 399,816
Posted By darshan
I am a little confused about this. In fig 6,...

I am a little confused about this.

In fig 6, the DNA is attached to flow-cell by both red and purple adapters in the same cluster. However, in fig 7, it is attached only by red adapters.

What...
Showing results 1 to 5 of 5

 


All times are GMT -8. The time now is 01:00 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO