SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 3 of 3
Search took 0.00 seconds.
Search: Posts Made By: vsmuir
Forum: Bioinformatics 08-14-2017, 11:07 AM
Replies: 2
Views: 4,595
Posted By vsmuir
Some solutions

If anyone else has run into this problem, I've found a couple of things that seem to help.

1) If you have similar problems with prefetch or fasp downloads fail:
Simply remove the -a and -t flags....
Forum: Bioinformatics 08-09-2017, 03:17 PM
Replies: 2
Views: 4,595
Posted By vsmuir
SRAtoolkit - prefetch and fastq-dump problems

I'm attempting to download a ton of protected GTEx data using sratoolkit.

Using fastq-dump alone for accession numbers is painfully slow. My Mac is taking 2-4 hours to get each ~3Gb file.
...
Forum: Bioinformatics 10-10-2016, 04:32 PM
Replies: 1
Views: 1,904
Posted By vsmuir
Limma selectModel output

I've been given a large RNAseq dataset on a biological process which I know little about. There is a ton of associated sample data, and I've built a ton of different linear models that include...
Showing results 1 to 3 of 3

 


All times are GMT -8. The time now is 07:37 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO