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Search: Posts Made By: ArtemLada
Forum: Bioinformatics 01-10-2016, 10:26 PM
Replies: 2
Views: 1,895
Posted By ArtemLada
Hey thanks dude! It solved this... Dont know why...

Hey thanks dude! It solved this... Dont know why there was this "-I", probably from obsolete pipeline I was using for older bwa version. Anyway, it worked, fresh look helps a lot!
Forum: Bioinformatics 01-10-2016, 01:44 AM
Replies: 2
Views: 1,895
Posted By ArtemLada
Lost pairing info after bwa mem

Dear all,

Seems I'm missing something trivial, but cant figure out.

I've got exome seq pipeline. 2 fastq files with corresponding paired reads. Both fastq files contain 92110130 reads each. I...
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