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Forum: Bioinformatics 06-02-2015, 10:10 AM
Replies: 20
Views: 145,275
Posted By westerman
You'll just love to know that the latest version...

You'll just love to know that the latest version of abyss-fac has ditched 'n:N50' (for the number) and 'N50' (for the length) in favor of 'L50' (for the number) and keeping 'N50' (length). Yes...
Forum: Bioinformatics 05-11-2015, 08:49 AM
Replies: 20
Views: 145,275
Posted By westerman
Having had my attention brought back to this...

Having had my attention brought back to this thread and having started using stats.sh from BBtools a lot more, I do note that stats.sh uses N/L50 to designate the Number of fragments at or above the...
Forum: Bioinformatics 06-13-2013, 08:52 AM
Replies: 20
Views: 145,275
Posted By westerman
@danwiththeplan: Your question doesn't make much...

@danwiththeplan: Your question doesn't make much sense since in this forum thread N50 is also known as L50. Since they are one and the same then there is no 'Whaaa?' involved -- they both represent...
Forum: Bioinformatics 08-18-2009, 07:04 AM
Replies: 20
Views: 145,275
Posted By westerman
Hah, I just answered this question yesterday for...

Hah, I just answered this question yesterday for one of my customers. While the Broad Institute's definition is good I find it overly mathematical. I sent my customer this quote from a paper on...
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