SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 3 of 3
Search took 0.00 seconds.
Search: Posts Made By: ameyer
Forum: Bioinformatics 03-01-2011, 08:51 AM
Replies: 10
Views: 5,983
Posted By ameyer
The only colons that are allowed in the @SQ lines...

The only colons that are allowed in the @SQ lines are the ones directly after SN and LN so the one you have between EG and bd would have to be removed. It would also have to be removed in all the...
Forum: Bioinformatics 03-01-2011, 07:39 AM
Replies: 10
Views: 5,983
Posted By ameyer
Tech support was able to find the cause of my...

Tech support was able to find the cause of my error in my SAM file. In the header section I had some colons as part of my contig names that messed up Cufflinks. By removing the colons in the header...
Forum: Bioinformatics 02-28-2011, 05:42 AM
Replies: 10
Views: 5,983
Posted By ameyer
Me too

I've had this error as well. I emailed the help email address and they said it's a rare issue with the software where the contig names have hash collisions. The problem should be fixed when they...
Showing results 1 to 3 of 3

 


All times are GMT -8. The time now is 02:33 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO