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Forum: De novo discovery 02-04-2018, 11:59 PM
Replies: 2
Views: 3,430
Posted By berthenet
Hi Seb, I see your point, but not all my low...

Hi Seb,

I see your point, but not all my low coverage contigs have a hit. The ones that do don't have the exact same hit, and the hits are not very good (the largest contig matching another...
Forum: De novo discovery 02-02-2018, 12:05 AM
Replies: 2
Views: 3,430
Posted By berthenet
Low K-mer coverage from a SPAdes assembly

Hi everyone!

I kind of asked the question on my presentation thread, but I think this is a better place to make sure I reach people who know about my issue.


So my lab ordered sequencing for a...
Forum: Introductions 02-01-2018, 06:08 AM
Replies: 2
Views: 1,063
Posted By berthenet
Just lost my post, I've been logged out during...

Just lost my post, I've been logged out during writing it. Note to myself: always copy my answer in my clipboard before posting...

So, let's right it all again.

Thanks for the links you shared....
Forum: Introductions 02-01-2018, 04:50 AM
Replies: 2
Views: 1,063
Posted By berthenet
Hello from a french bio-informatician looking for help with NextSeq500 Illumina data

Hi everyone!

It doesn't look like there are a lot of answers to the presentation threads, but I'm going to introduce myself anyway. Feel free to jump in and have a chat with me if you feel like...
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