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Forum: The Pipeline 02-01-2014, 12:28 AM
Replies: 7
Views: 11,699
Posted By ymc
http://www.quantumbiosystems.com/about/team.html?l...

http://www.quantumbiosystems.com/about/team.html?lang=eng

Interesting. Nava Whiteford and Johnathan Teutenberg jumped ship from Oxford Nanopore.
Forum: The Pipeline 01-30-2014, 06:19 PM
Replies: 7
Views: 11,699
Posted By ymc
From the pdf: I hope this is not the read length...

From the pdf: I hope this is not the read length of the final product or the read length here is not the same thing as the read length I know...

"4 Read length distribution
GATGAT GTGATG TATAG...
Forum: The Pipeline 01-30-2014, 06:11 PM
Replies: 7
Views: 11,699
Posted By ymc
wow. The data is really "raw". Only rows of...

wow. The data is really "raw". Only rows of floats within the range of 0 and 0.025

According to the accompanying pdf, you need to write your own HMM to call the bases. I don't see that the HMM has...
Forum: The Pipeline 01-30-2014, 05:46 PM
Replies: 7
Views: 11,699
Posted By ymc
Nicely done website. In particular, am...

Nicely done website.

In particular, am impressed by their claim that it can detect methylation during sequencing. I think this can help greatly when doing tumor-normal comparions.

The only...
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