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Search: Posts Made By: Alvaro Hernandez
Forum: Academic/Non-Profit Jobs 03-26-2018, 02:02 PM
Replies: 0
Views: 458
Posted By Alvaro Hernandez
Visiting Research Specialist in Life Sciences HPCBio

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The Roy J. Carver Biotechnology Center has an opening for a Visiting Research Specialist in Life Science in HPCBio. The primary function of the position is to process and analyze...
Forum: Sample Prep / Library Generation 10-09-2015, 12:37 PM
Replies: 2
Views: 1,758
Posted By Alvaro Hernandez
TruSeq Stranded mRNA HT kits, column 3 adaptors do not work with v4 chemistry?

Hello,

We are experiencing an issue with the TruSeq Stranded mRNA HT kit. We prepared three 96-well plates of RNAseq libraries in our EpMotion robots. The libraries are very consistent and have...
Forum: Academic/Non-Profit Jobs 03-08-2013, 01:18 PM
Replies: 0
Views: 862
Posted By Alvaro Hernandez
Visiting Research Specialist in Life Sciences HPCBio

Search Extended

The Roy J. Carver Biotechnology Center has an opening for a Visiting Research Specialist in Life Science in HPCBio. The primary function of the position is to process and analyze...
Forum: Academic/Non-Profit Jobs 10-21-2011, 09:12 AM
Replies: 0
Views: 1,380
Posted By Alvaro Hernandez
Smile Visiting Research Specialist in Life Sciences, University of Illinois

Visiting Research Specialist in Life Sciences
Roy J. Carver Biotechnology Center

Proposed Starting Date: As soon as possible after closing date

Qualifications: B.S. with 2 or more years of...
Forum: Bioinformatics 01-18-2010, 08:58 AM
Replies: 37
Views: 36,078
Posted By Alvaro Hernandez
Thanks

Thanks kmcarr, it is good to know that. I usually just deal with the standard pipeline but this time GERALD could not finish the alignment and had to merge these files, so I am learning all these...
Forum: Bioinformatics 01-18-2010, 08:20 AM
Replies: 37
Views: 36,078
Posted By Alvaro Hernandez
***Thanks!!

Xi Wang,

Your modified script run perfectly. Thanks again for sharing your expertise and following up with this. You saved my day.

AH
Forum: Bioinformatics 01-18-2010, 07:45 AM
Replies: 37
Views: 36,078
Posted By Alvaro Hernandez
one more question

Xi Wang,

Thank you for your help, it now worked!

One more question: The fastq file from GERALD has the following structure for each read:

@HWI-EAS385_0042:7:1:54:1892#0/1...
Forum: Bioinformatics 01-15-2010, 04:29 PM
Replies: 37
Views: 36,078
Posted By Alvaro Hernandez
Need help on this topic

I need to get this script to work with the qseq.txt files in GERALD from pipeline 1.5 Could someone modify it so that it works?. There may be a difference with the qseq.txt files from previous...
Forum: Academic/Non-Profit Jobs 09-17-2009, 06:44 AM
Replies: 0
Views: 2,333
Posted By Alvaro Hernandez
Senior Research Specialist for DNA library Services, UIUC. Extended Search

Extended Search
Senior Research Specialist in Life Sciences
Roy J. Carver Biotechnology Center

Proposed Starting Date: To be determined after search closes

Qualifications: B.S. with...
Forum: Academic/Non-Profit Jobs 09-10-2009, 01:20 PM
Replies: 0
Views: 1,567
Posted By Alvaro Hernandez
Smile Senior Research Specialist for DNA library Services, UIUC

Senior Research Specialist in Life Sciences
Roy J. Carver Biotechnology Center

Proposed Starting Date: To be determined after search closes

Qualifications: B.S. with demonstrated experience or...
Forum: Academic/Non-Profit Jobs 07-07-2009, 01:51 PM
Replies: 0
Views: 1,923
Posted By Alvaro Hernandez
Next-Gen Bioinformatics, University of Illinois at Urbana-Champaign

Extended Search
Research Specialist in Life Sciences
Roy J. Carver Biotechnology Center

Proposed Starting Date: As soon as possible after closing

Qualifications: B.S. degree, M.S. preferred,...
Forum: Illumina/Solexa 05-29-2009, 11:30 AM
Replies: 6
Views: 2,602
Posted By Alvaro Hernandez
James, today we are setting up our second...

James, today we are setting up our second paired-end run on the same gDNA samples, both runs done in May 2009. Both runs had low starting intensities (200s for C, 400s for A and 800-900 for T and G....
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