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Forum: Bioinformatics 08-23-2016, 11:56 PM
Replies: 0
Views: 771
Posted By vivi7
Understanding Pi estimates

Hi all,

We are using MEGA7 to estimate genetic diversity values from RAD seq data. Does any of you knows what is the difference between the Pi estimated with the option "Distance -> Compute Mean...
Forum: Bioinformatics 08-16-2016, 12:46 AM
Replies: 2
Views: 1,125
Posted By vivi7
Thanks!

Thank you very much!
It turned out that several servers shared an area on a filer that wasn't working... so now we can solve the problem (hopefully)!
Thanks super much for the help!!!!:)
Forum: Bioinformatics 08-15-2016, 05:07 AM
Replies: 2
Views: 1,125
Posted By vivi7
Unknown error with Stampy

Hi all,

I am trying to do some paired-end mapping to a genome with Stampy, and I get an error that I don't manage to find any information about:


[[email protected]_vs02 stampy-1.0.23]$...
Forum: General 08-15-2016, 05:02 AM
Replies: 11
Views: 41,343
Posted By vivi7
Thanks

Thank you very much :)
Forum: General 08-15-2016, 04:47 AM
Replies: 11
Views: 41,343
Posted By vivi7
Unhappy Question

I'm very sorry for the probably stupid question, but how can I create a new post here?
Forum: Bioinformatics 05-15-2014, 12:01 AM
Replies: 13
Views: 5,090
Posted By vivi7
Thank you very much!!! :)

Thank you very much!!! :)
Forum: Bioinformatics 05-14-2014, 01:49 AM
Replies: 13
Views: 5,090
Posted By vivi7
Smile fastx_barcodes_splitter issue with the run

Hi,

I saw the post and I hope maybe some of you can help me :)

When I run fastx_barcode_splitter.pl with this script

/usr/local/bin/fastx_barcode_splitter.pl --bcfile ./Barcodes9nt.txt...
Forum: Bioinformatics 05-14-2014, 01:49 AM
Replies: 36
Views: 8,839
Posted By vivi7
Smile fastx_barcodes_splitter issue with run

Hi,

I saw the post and I hope maybe some of you can help me :)

When I run fastx_barcode_splitter.pl with this script

/usr/local/bin/fastx_barcode_splitter.pl --bcfile ./Barcodes9nt.txt...
Forum: Bioinformatics 03-18-2014, 12:40 AM
Replies: 1
Views: 1,117
Posted By vivi7
Hi again, I am posting the reply I got from...

Hi again,

I am posting the reply I got from Gerton Lunter,
so that if someone new to the field like me will have same problems will find an answer hopefully

'1: no, you should map one sample...
Forum: Bioinformatics 03-17-2014, 06:02 AM
Replies: 1
Views: 1,117
Posted By vivi7
Question Stampy - Mapping multiple individuals to genome

Stampy - Mapping multiple individuals to genome
Hi everybody,

I am very very new to this world, so apologize if the following questions are too basic...
I am trying to use Stampy to map my...
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