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Forum: Bioinformatics 11-13-2009, 01:12 PM
Replies: 7
Views: 3,418
Posted By ernesto
Thanks for you replies, but as far as I...

Thanks for you replies, but as far as I understand the -rmm option in MosaikSort is for paired-end reads, and my data is single ended.
Do you think this option will work with single-end reads as...
Forum: Bioinformatics 11-09-2009, 08:22 AM
Replies: 7
Views: 3,418
Posted By ernesto
Mosaik alignment

Dear All,

I am using MosaikAligner with -m all option. This option map a read into all possible locations (each location with a certain alignment quality). Is there a way to get the alignment with...
Forum: Bioinformatics 11-09-2009, 05:17 AM
Replies: 0
Views: 1,296
Posted By ernesto
MosaikTools

HI,

I am trying to use the MosaikTools perl API to access the alignments created by MosaikAligner but when I run the perl sample script that the authors provide (MosaikReaderTest.pl) I got the...
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