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Forum: RNA Sequencing 05-11-2016, 03:02 PM
Replies: 22
Views: 5,862
Posted By antoshka
Hi, I think you are having the same problem that...

Hi, I think you are having the same problem that I originally had when I started using htseq-count: namely using the wrong input to run DESeq.
htseq-count writes the count table directly into...
Forum: RNA Sequencing 05-09-2016, 08:09 PM
Replies: 22
Views: 5,862
Posted By antoshka
I think the error you describe may be due to...

I think the error you describe may be due to mismatch between the count tables that you provided (e.g. different number of rows, non-unique rows, typos).
How did you generate your input files? How...
Forum: RNA Sequencing 06-17-2015, 09:07 PM
Replies: 22
Views: 5,862
Posted By antoshka
Hello pm2012, I am having the same problem that...

Hello pm2012,
I am having the same problem that you had back then.
I also just used the file produced by -o option and got the same error message.
How exactly did you redirect your output file to...
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