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Search: Posts Made By: nilshomer
Forum: Bioinformatics 10-25-2010, 09:57 PM
Replies: 9
Views: 9,808
Posted By nilshomer
Is the base quality not already reported in the...

Is the base quality not already reported in the SAM record (it should be)? As to how to calculate the base qualities during alignment from color qualities, here is the formula MAQ/BWA/BFAST uses:...
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