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Forum: Bioinformatics 07-21-2011, 03:07 AM
Replies: 0
Views: 1,223
Posted By novi
.afg to coverage plot

Hey,
I have made an assembly with velvet while producing an amos .afg file. This file contains the information on the position of all the reads relative to the contigs right? So in principle I...
Forum: Bioinformatics 06-30-2011, 02:28 AM
Replies: 0
Views: 1,663
Posted By novi
downsampling high coverage regions in SAGs

Hi,

I am working with single cell amplified genomes (SAGs), which leads to a very uneven distribution of reads among the genome; some regions will have extremely high coverage and some extremely...
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