Forum: Bioinformatics
10-12-2011, 08:43 PM
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Replies: 10
Views: 7,160
problem installing velvet
Hi RachelWu, mandar.sahasrabuddhe
did any of you resolved the problem.PLease let me know.I m new to assembling and i m facing the same error..
src/readSet.c:35:18: error: zlib.h: No such file...
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Forum: De novo discovery
10-06-2011, 01:26 AM
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Replies: 16
Views: 15,025
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Forum: Bioinformatics
10-05-2011, 11:07 PM
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Replies: 3
Views: 2,018
thank you swbarnes2.
Yeah. I can see two...
thank you swbarnes2.
Yeah. I can see two '307AEAAXX:4:1:1591:659' patterns from the file. I can understand it is PE data file.
But, why did the length reduce to 84 in forward ,84 in reverse...
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Forum: Bioinformatics
10-04-2011, 10:53 PM
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Replies: 3
Views: 2,018
query: obtaining SE and PE files from fastq
Hi all, I am a bit new to assembling stuff. Please spare me and answers even if my questions looks a bit silly.
I obtained an .SRA file ( 200bp PE Illumina reads ) from NCBI traces archive....
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Forum: Bioinformatics
10-04-2011, 08:23 PM
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Replies: 2
Views: 2,781
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Forum: Bioinformatics
10-03-2011, 11:43 PM
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Replies: 2
Views: 2,781
Query on K-mer using in velvet
Hi, I am newbie to NGS. TO assemble a genome i started using velvet. During which I came across a term called 'K-mer' which means the overlapping segment in the reads. I would like to know that if...
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Forum: Introductions
09-26-2011, 02:25 AM
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Replies: 0
Views: 2,216
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