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Forum: Bioinformatics 07-19-2018, 06:34 AM
Replies: 347
Views: 185,363
Posted By jsena33
Hi GenoMax, Thanks for the suggestion! I...

Hi GenoMax,

Thanks for the suggestion! I have used UMI tools which works ok but I am working with long reads with a higher error rate (indel bias) than Illumina reads. Therefore, it is likely that...
Forum: Bioinformatics 07-18-2018, 09:46 PM
Replies: 347
Views: 185,363
Posted By jsena33
Hi All, Is it possible to match degenerate...

Hi All,

Is it possible to match degenerate sequences like below, trim the sequences and place the degenerate sequences in the fastq header? I am attempting to trim an adapter with the following...
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