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Forum: Bioinformatics 10-28-2014, 09:45 AM
Replies: 347
Views: 185,363
Posted By lankage
bbduk forcetrimright option

Hi Brian,
Thanks for making the additions! That was exactly what i needed to improve my workflow. One observation i made while looking at differences between the output of bbduk and flexbar is...
Forum: Bioinformatics 10-27-2014, 12:11 PM
Replies: 347
Views: 185,363
Posted By lankage
Version 33.73 BBduk

Thanks alot for the addition! I downloaded version 33.73 of BBtools and I can see the options for restrictleft and restrictright in the help text when running the script with no parameters. I get a...
Forum: Bioinformatics 10-27-2014, 09:41 AM
Replies: 347
Views: 185,363
Posted By lankage
bbduk end trimming

Hi Brian,
I have been trying to use bbduk to trim primer sequences from paired end fastq files and came across a problem. I have been wanting to replace a primer trimming tool, flexbar, with bbduk...
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