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Forum: Bioinformatics 01-14-2016, 04:05 AM
Replies: 0
Views: 643
Posted By alaminos
Softwares to detect selection using LD methods

Dear all,

Can you suggest any software's similar to sweep for detecting evidence of selection using linkage disequilibrium based methods?

Thanks

Panas
Forum: Bioinformatics 12-06-2015, 02:09 AM
Replies: 1
Views: 1,123
Posted By alaminos
measuring mutation rates from NGS data

Dear all,

Do you know of any list of software that can calculate population mutation rates from NGS data.

Thanks a lot.
Forum: Sample Prep / Library Generation 09-26-2015, 02:03 AM
Replies: 4
Views: 1,360
Posted By alaminos
Thanks a lot for your suggestion. I will ask...

Thanks a lot for your suggestion. I will ask regarding how flexible we are with the setup.
Forum: Sample Prep / Library Generation 09-23-2015, 06:51 AM
Replies: 4
Views: 1,360
Posted By alaminos
Thanks for your answer. If we use 2 plates that...

Thanks for your answer.
If we use 2 plates that means 95 additional RAD libraries and our budjet unfortunately is limited.
Forum: Sample Prep / Library Generation 09-21-2015, 10:34 PM
Replies: 4
Views: 1,360
Posted By alaminos
RAD-seq pool or not newbie question

Dear all,

So my question is regarding pooling individuals or not for RAD-seq.
First of all we will use 3 lanes of illumina hi seq 2500 and my project involves sequencing of bees across 18 sites....
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