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Forum: Bioinformatics 03-10-2015, 01:47 AM
Replies: 24
Views: 5,789
Posted By batel
Hi all, Thanks for yo9ur answers! I'm using...

Hi all,
Thanks for yo9ur answers!
I'm using version v1.4.6, Is it the latest?
I also tried using Rsubread instead of directly, but it also crashes.
The command is:
featureCounts -p -T 5 -g...
Forum: Bioinformatics 02-17-2015, 11:18 PM
Replies: 24
Views: 5,789
Posted By batel
I tried cufflinks and it works great..

that's why I don't think that the problem is at the BAM files..
Do you think it's the BAM file?
Forum: Bioinformatics 02-17-2015, 12:08 AM
Replies: 24
Views: 5,789
Posted By batel
featureCounts segmentation fault

I have a lot of BAM files (from CCLE database), and I tried counting them using featureCounts.
Some of the files works great, but many(!) of them featureCounts throws segmentation fault right after...
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