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Forum: RNA Sequencing 07-15-2014, 01:01 AM
Replies: 0
Views: 1,937
Posted By StevenVanLaere
Unhappy 0% Concordant Pair Alignment Rate

Dear all,

After aligning a paired-end library to the reference genome using TopHat2 with settings: inner mate distance = 0, standard deviation inner mate distance = 200 (based on the traces...
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