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Search: Posts Made By: Haledm
Forum: Bioinformatics 07-30-2018, 03:02 PM
Replies: 0
Views: 321
Posted By Haledm
Adding Blastx Hits to un-identified genes in StringTie Output

Hi all,

I've been using a general pipeline of Hisat2 -> StringTie -> Ballgown for differential gene expression analysis in a non-model organism. Using RefSeq annotations during StringTie assembly...
Forum: Bioinformatics 05-23-2018, 12:14 PM
Replies: 2
Views: 1,922
Posted By Haledm
Hi! This has been immensely helpful, as I'm...

Hi! This has been immensely helpful, as I'm addressing the same issue as OP. But do you have a similar recommendation on how to generate the SS table if the reference annotations do not contain...
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