Forum: Bioinformatics
11-15-2015, 07:15 PM
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Replies: 2
Views: 2,405
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Forum: Bioinformatics
09-17-2015, 09:12 PM
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Replies: 5
Views: 3,061
I did find out that I can export from the...
I did find out that I can export from the individual .rma files for each of my samples for a select COG or taxa. The export function for some stuff appears to be unavailable when you're working with...
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Forum: Bioinformatics
08-27-2015, 08:38 PM
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Replies: 5
Views: 3,061
here in lies the problem. When I try to do...
here in lies the problem. When I try to do exactly what you have listed about Mina for the COG viewer the Export -> Reads tab is greyed out and I can't hit it. Only the export csv, biome, metadata...
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Forum: Bioinformatics
08-27-2015, 08:03 PM
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Replies: 1
Views: 1,304
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Forum: Bioinformatics
06-25-2015, 06:42 PM
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Replies: 5
Views: 3,061
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Forum: Bioinformatics
06-25-2015, 12:09 AM
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Replies: 5
Views: 3,061
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Forum: Metagenomics
04-27-2015, 09:29 PM
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Replies: 2
Views: 2,403
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Forum: Bioinformatics
02-09-2015, 07:15 PM
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Replies: 11
Views: 8,550
here we go again..
I know now my issue was not having enough blast hits to let the LCA algorithm work.
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Forum: Bioinformatics
10-07-2014, 05:16 PM
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Replies: 1
Views: 1,893
riboPicker for rRNA removal from sequence data
hi,
I have used Ribopicker online in the past to remove any remaining rRNA sequences from the mRNA enriched libraries I made from soil metatranscriptomes sequenced on an Illumina HiSeq using a...
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Forum: Metagenomics
10-28-2012, 06:43 PM
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Replies: 7
Views: 4,357
Becareful if using MEGAN that you don't waste...
Becareful if using MEGAN that you don't waste time by doing your blasts against the wrong database.
MEGAN likes NCBI taxonomy for BLASTN, BLASTX or BLASTP to compare against NCBI-NT, NCBI-NR or...
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Forum: Bioinformatics
10-14-2012, 10:18 PM
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Replies: 11
Views: 8,550
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