Forum: Bioinformatics
11-24-2018, 02:24 AM
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Replies: 0
Views: 787
Umi-tools
Hello,
i'am processing Fastq with umis, when i use umi-tools count, (after umi extraction, mapping and deduplication) the output file is emty. i am wondering if anyone can help me out ?
Thank you
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Forum: Bioinformatics
09-28-2018, 12:12 AM
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Replies: 6
Views: 1,072
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Forum: Bioinformatics
09-27-2018, 07:48 AM
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Replies: 6
Views: 1,072
Thank you for you reply.
i need to understand...
Thank you for you reply.
i need to understand some details, once i have a BAM file, before variant calling i have to remove duplicate, recalibrate BAM? run other metrics ?
sorry i am completely new...
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Forum: Bioinformatics
09-27-2018, 12:54 AM
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Replies: 6
Views: 1,072
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Forum: Bioinformatics
09-26-2018, 11:13 AM
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Replies: 6
Views: 1,072
metrics on BAM file
Hi everyone,
I am doing exome sequencing, paired end, but not used to analyze reads.
After alignement, how do i proceed the BAM file?
Thank you
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