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Search: Posts Made By: sebastian_1
Forum: Bioinformatics 05-03-2017, 05:25 AM
Replies: 590
Views: 109,448
Posted By sebastian_1
Hello Brian, I would like to ask you a...

Hello Brian,

I would like to ask you a suggestion for bbmap.
I am trying to reassemble a bin from a metagenomic data, hoping that I will get better assembly if I use just the mapped reads.
I...
Forum: Bioinformatics 03-16-2017, 03:00 AM
Replies: 590
Views: 109,448
Posted By sebastian_1
Hi Brian, Thank you for your quick reply....

Hi Brian,

Thank you for your quick reply. I've tried to run BBNorm with prefilter=t and bits=16 on our server, but I still run out of memory. I have a server with 128GB of RAM, and I've tried also...
Forum: Bioinformatics 03-15-2017, 01:57 PM
Replies: 590
Views: 109,448
Posted By sebastian_1
Hello, I am new to this forum so I apologize...

Hello,

I am new to this forum so I apologize if I posted in the wrong place.

Currently I am trying to assemble a single cell genome from some Illumina Hiseq 2x250 bp reads.
One of my first...
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