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Forum: Bioinformatics 01-31-2019, 04:26 AM
Replies: 32
Views: 19,271
Posted By pepe84
here is the command: java -cp...

here is the command:
java -cp C:\BBMap\current\jgi.ReformatReads in=C:\BBMap\resources\SRRXXXXX.fastq out1=EFB_R1.fq out2=EFB_R2.fq

And here is the error:
Error: Could not find or load main...
Forum: Bioinformatics 01-30-2019, 12:54 PM
Replies: 32
Views: 19,271
Posted By pepe84
hello folks, I am trying to work on a FASTQ file...

hello folks, I am trying to work on a FASTQ file using reformat.sh, although I have correctly installed Java and tested it in the command line, I still can't get it to work. It seems the problem is...
Forum: RNA Sequencing 02-24-2015, 02:34 PM
Replies: 61
Views: 31,825
Posted By pepe84
heatmap scale

Hi guys,

I am trying to get a heatmap for all my differentially expressed genes (500 total). However I am experiencing difficulties with this. I tried to manually input all gene codes to R, use...
Forum: Bioinformatics 02-24-2015, 02:27 PM
Replies: 15
Views: 10,218
Posted By pepe84
Heatmap scale

Hi guys,

I am trying to get a heatmap for all my differentially expressed genes (500 total). However I am experiencing difficulties with this. I tried to manually input all gene codes to R, use...
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