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Forum: Bioinformatics 08-22-2013, 02:35 AM
Replies: 3
Views: 4,291
Posted By mevers
Hi Simon. Yes, that was a silly mistake, you...

Hi Simon.

Yes, that was a silly mistake, you are absolutely right. I've changed it now in the original post. It should have read
type=c("T1","T1","T2","T2","T2","T2")

Cheers,
Maurits
Forum: Bioinformatics 08-21-2013, 01:08 AM
Replies: 3
Views: 4,291
Posted By mevers
DESeq2: Difference between condition+type vs. 3 conditions

Dear all.

I am unsure about how to use DESeq2 in the case of 3 conditions vs. 2 conditions + 2 types. Assuming I have the following design table

condition type
sample1 A ...
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