SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 2 of 2
Search took 0.00 seconds.
Search: Posts Made By: Michael.Ante
Forum: Bioinformatics 09-20-2016, 02:45 AM
Replies: 4
Views: 1,641
Posted By Michael.Ante
The bam_stat.py was a suggestion since it also...

The bam_stat.py was a suggestion since it also works for DNA-seq alignments (you'll hopefully don't see spliced reads).
You can also have a look at the QC-metrics from Picard tools, or have a look...
Forum: Bioinformatics 09-20-2016, 12:19 AM
Replies: 4
Views: 1,641
Posted By Michael.Ante
Hi Rangika, 2nd first: You need to be...

Hi Rangika,

2nd first:
You need to be aware of the fact that samtools flagstat produces statistics on alignments. Meaning, a read can align multiple time and will occur multiple times in the...
Showing results 1 to 2 of 2

 


All times are GMT -8. The time now is 11:22 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO