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Forum: General 06-04-2017, 04:08 PM
Replies: 4
Views: 1,061
Posted By GenoMax
You could use mapPacBio.sh from BBMap (which...

You could use mapPacBio.sh from BBMap (which chunks input sequences into 6 kb pieces and then aligns them).

In this size range though you could use BLAT or LASTZ as other alternatives.
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