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Search: Posts Made By: abelhj
Forum: Bioinformatics 12-01-2010, 10:50 PM
Replies: 5
Views: 3,421
Posted By abelhj
Samtools/bcftools problem

I'm using samtools to look for SNPs with ultradeep (>18,000X) coverage. For some reason samtools and bcftools does not call some of the SNPs.

...
Forum: Illumina/Solexa 12-30-2009, 12:20 PM
Replies: 1
Views: 1,910
Posted By abelhj
paired-end question

Hi,

I am trying to figure out Solexa paired end read output. Can someone please tell me if my toy example is correct?

1) One end of DNA is bound to substrate (##). Free end is sequenced in...
Forum: Illumina/Solexa 12-30-2009, 12:03 PM
Replies: 38
Views: 58,333
Posted By abelhj
Sorry my graphic got messed up. Here it is...

Sorry my graphic got messed up. Here it is again.

Hi,

I am trying to figure out Solexa paired end read output. Can someone please tell me if my toy example is correct?

1) One end of DNA...
Forum: Illumina/Solexa 12-30-2009, 12:02 PM
Replies: 38
Views: 58,333
Posted By abelhj
Hi, I am trying to figure out Solexa paired...

Hi,

I am trying to figure out Solexa paired end read output. Can someone please tell me if my toy example is correct?

1) One end of DNA is bound to substrate. Free end is sequenced in...
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