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Forum: SOLiD 01-01-2014, 08:26 PM
Replies: 2
Views: 8,084
Posted By slowsmile
Thanks Kaiye for your suggestion However, I...

Thanks Kaiye for your suggestion

However, I am still unable to convert the SoLID bam files into Pindel compatible format with the sam2pindel function. The reads in my SoLID bam file looks like...
Forum: SOLiD 12-24-2013, 05:23 PM
Replies: 2
Views: 8,084
Posted By slowsmile
Can Pindel applied to SOLiD data?

Dear All
Just want to know if anyone has relevant experiences in calling INDELS using Pindel on SOLiD data. We used Pindel on Illumina samples (bam files) with good outcome but now when we moved to...
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