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Forum: Bioinformatics 08-02-2017, 10:24 AM
Replies: 2
Views: 1,808
Posted By charon
Makes sense. Thanks dpryan!

Makes sense. Thanks dpryan!
Forum: Bioinformatics 07-31-2017, 03:51 PM
Replies: 2
Views: 1,808
Posted By charon
what does "average quality" mean in samtools stat

I used samtools stats to measure some basic metrics of a input bam file and got the following results:


raw total sequences: 1105415
filtered sequences: 80516
sequences: 1024899
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