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Search: Posts Made By: Neytiri
Forum: Bioinformatics 05-04-2017, 06:45 AM
Replies: 0
Views: 1,079
Posted By Neytiri
time course multi-factor design with DESeq2

Hi,

I'm looking for some help on the analysis of a multi-factor design with DESeq2.

I have a 4-factor experiment:
Groups: A (8 Donors), B (4 Donors), C (4 Donors), D (4 Donors)
Treatment:...
Forum: Bioinformatics 12-02-2014, 02:32 AM
Replies: 3
Views: 1,218
Posted By Neytiri
Hi Alejandro, Thanks for your reply. After...

Hi Alejandro,

Thanks for your reply. After reading your post I understood the issue!

When I do:
> dxr = DEXSeqResults( dxd )
> plotDEXSeq(dxr, gene)
then the exons in the plot are ordered by...
Forum: Bioinformatics 11-26-2014, 03:14 AM
Replies: 3
Views: 1,218
Posted By Neytiri
plotDEXSeq reorder x-axis

Hi,

I'm using plotDEXSeq to visualize the results of a DEXSeq (v1.10.8) analysis: plotDEXSeq( dxr, gene).

However, the exons listed in the x-axis show up by increasing order of padj, e.g. E025...
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