SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 3 of 3
Search took 0.02 seconds.
Search: Posts Made By: schumric
Forum: Illumina/Solexa 01-09-2017, 11:37 AM
Replies: 3
Views: 1,066
Posted By schumric
I don't know if this helps, but I'm breaking down...

I don't know if this helps, but I'm breaking down the steps currently to see what is failing.

1. /home/sean/Desktop/assembly_software/samtools-1.3.1/samtools mpileup -d8000 -uf...
Forum: Illumina/Solexa 01-09-2017, 10:49 AM
Replies: 3
Views: 1,066
Posted By schumric
Thank you for the reply. I tried to adjust the...

Thank you for the reply. I tried to adjust the command so that it couldn't default to a different bcf tools version:

/home/sean/Desktop/assembly_software/samtools-1.3.1/samtools mpileup -d8000 -uf...
Forum: Illumina/Solexa 01-09-2017, 09:55 AM
Replies: 3
Views: 1,066
Posted By schumric
Question: bcftools: Wrong number of PL fields? nals=4 npl=6

Hello all,

I am new to bcftools and samtools, so forgive my question if it is ignorant. My goal is to extract consensus sequences between two different species.

I was given paired-end Illumina...
Showing results 1 to 3 of 3

 


All times are GMT -8. The time now is 05:14 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2018, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO