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Old 01-27-2010, 10:00 AM   #1
Location: Spain

Join Date: Jan 2010
Posts: 38
Default BFAST and read error correction (with SAET or similar tool)

Hi all,

According BFAST paper(s), this tool is capable of managing read errors in color space of SOLiD data.

Does anybody knows if it is also convenient to clean/correct/purge raw data with accuracy enhancement tools (like SAET) prior to use BFAST? Or maybe is it not wise to do it in order to not alter the BFAST behavior?

I've read that it is highly convenient to use SAET (or similar tool) to improve the quality of data prior to use align/assembly tools, but maybe this recommendation is prior to development of BFAST.

Any experience?

Thanks in advance.
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