Does anybody know of a good resource explaining how to convert file formats? I'm interested in mapping a .sra file onto the genome to look for splicing variation, but I don't know how to convert .sra to gtf or something more amenable.
Thanks, I'll try that.
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Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
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