Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • dphansti
    Member
    • May 2011
    • 28

    #1

    MACS2 installation problem

    I am trying to install MACS2 on a computer running OSX 10.9.2. I have Python 2.7.5 and numpy is properly installed. I get the error message below. Can anyone offer suggestions? Thanks.

    > easy_install MACS2

    ...

    clang: error: unknown argument: '-mno-fused-madd' [-Wunused-command-line-argument-hard-error-in-future]

    clang: note: this will be a hard error (cannot be downgraded to a warning) in the future

    error: Setup script exited with error: command 'cc' failed with exit status 1
    Doug
    www.sharedproteomics.com
  • GenoMax
    Senior Member
    • Feb 2008
    • 7142

    #2
    Do you have Xcode 5.1 installed? If not do that first from the app store.

    If you do have Xcode then try the first answer (xcode-select --install) suggested in this post. It is not directly related to your question but worth a try: http://stackoverflow.com/questions/1...-mac-os-x-10-9
    Last edited by GenoMax; 03-27-2014, 02:49 PM. Reason: clarification about xcode

    Comment

    • dphansti
      Member
      • May 2011
      • 28

      #3
      Thanks. I do have xcode and command line tools installed.

      I posted the same question on github and got some responses though I still haven't gotten it working yet.

      Doug
      www.sharedproteomics.com

      Comment

      • dphansti
        Member
        • May 2011
        • 28

        #4
        In case anyone else has the same problem you can see the solution here (https://github.com/taoliu/MACS/issue...mment-38860524).
        Doug
        www.sharedproteomics.com

        Comment

        Latest Articles

        Collapse

        • SEQadmin2
          Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
          by SEQadmin2



          Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

          Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
          ...
          Yesterday, 09:55 AM
        • SEQadmin2
          New Genomics Technologies Take Aim at Long-Standing Limits
          by SEQadmin2


          Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.

          We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing
          ...
          09-28-2026, 10:25 AM

        ad_right_rmr

        Collapse

        News

        Collapse

        Topics Statistics Last Post
        Started by SEQadmin2, Yesterday, 05:39 AM
        0 responses
        12 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 10-13-2026, 09:56 AM
        0 responses
        14 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 10-09-2026, 11:14 AM
        0 responses
        27 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 09-29-2026, 09:51 AM
        0 responses
        78 views
        0 reactions
        Last Post SEQadmin2  
        Working...