bedTools 2.20.1 coverageBed

[cmccabe]

The output of the bedTools command:

coverageBed -hist -d -abam IonXpress_001.bam -b LCH_IDT > output.bam.hist.txt

resulted in output like below (output 1 - 6 fields)

output 1

chr12	112884064	112884217	chr12:112884064-112884217
	1	141
chr12	112884064	112884217	chr12:112884064-112884217
	2	140

and now the same bedTools command outputs (5 fields):

chr1	40539722	40539865	1	159
chr1	40539722	40539865	2	161

Did something change or is there an option I am forgetting to use? Thank you

[cmccabe]

Forgot to concatenate a line in the bed, its working now. Thank you .