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  • LJ_ngs
    Junior Member
    • Sep 2012
    • 3
    #1

    RepeatMasker v4.0.5 no output created

    I am running RepeatMasker v4.0.5

    the command line is :

    RepeatMasker -lib my_own_lib.fasta -dir output_directory output_name


    This command runs fine on two of my datasets (trimmed repeats) but fails on the untrimmed repeats.

    The only error I get is

    cannot read file output_name in output_directory

    Anyone had similar issues? any suggestions?
    Tags: output file, repeat masker, repeats
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