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  • SS1234
    Junior Member
    • Jun 2010
    • 3

    #1

    Paired end Short read data

    Hi there ,

    I am new to this field. Can anybody tell me where could I get the Paired end short reads data?

    Thanks.
  • nilshomer
    Nils Homer
    • Nov 2008
    • 1283

    #2
    Originally posted by SS1234 View Post
    Hi there ,

    I am new to this field. Can anybody tell me where could I get the Paired end short reads data?

    Thanks.
    Do you have a sequencing machine or are you looking for publicly available data?

    Comment

    • SS1234
      Junior Member
      • Jun 2010
      • 3

      #3
      @ nilshomer

      I am looking for publicly available data.

      Thanks.

      Comment

      • nilshomer
        Nils Homer
        • Nov 2008
        • 1283

        #4
        Originally posted by SS1234 View Post
        I am looking for publicly available data.

        Thanks.
        Try the sequence read archive.

        Comment

        • lmf_bill
          Member
          • Jul 2008
          • 36

          #5
          Try the sequence read archive (SRA) in NCBI entry

          Comment

          • SS1234
            Junior Member
            • Jun 2010
            • 3

            #6
            @ every one replied

            Thanks nilshomer and Imf bill

            Comment

            • john_mu
              Member
              • May 2010
              • 88

              #7
              Another place is GEO, if you want RNA-seq data

              Gene Expression Omnibus (GEO) is a database repository of high throughput gene expression data and hybridization arrays, chips, microarrays.
              SpliceMap: De novo detection of splice junctions from RNA-seq
              Download SpliceMap Comment here

              Comment

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