Thread: Bowtie, an ultrafast, memory-efficient, open source short read aligner
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Old 10-24-2008, 12:05 AM   #8
dmamartin
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Location: Dundee

Join Date: Jul 2008
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Originally Posted by dmamartin View Post
Bowtie - 20 seconds.
That is with --best -k 100, not the most speedy of searches.
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